Package: GeneticSubsetter 0.8

GeneticSubsetter: Identify Favorable Subsets of Germplasm Collections

Finds subsets of sets of genotypes with a high Heterozygosity, and Mean of Transformed Kinships (MTK), measures that can indicate a subset would be beneficial for rare-trait discovery and genome-wide association scanning, respectively.

Authors:Ryan C. Graebner and Alfonso Cuesta-Marcos

GeneticSubsetter_0.8.tar.gz
GeneticSubsetter_0.8.zip(r-4.7)GeneticSubsetter_0.8.zip(r-4.6)GeneticSubsetter_0.8.zip(r-4.5)
GeneticSubsetter_0.8.tgz(r-4.6-any)GeneticSubsetter_0.8.tgz(r-4.5-any)
GeneticSubsetter_0.8.tar.gz(r-4.7-any)GeneticSubsetter_0.8.tar.gz(r-4.6-any)
GeneticSubsetter_0.8.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
GeneticSubsetter/json (API)

# Install 'GeneticSubsetter' in R:
install.packages('GeneticSubsetter', repos = c('https://ryan-graebner.r-universe.dev', 'https://cloud.r-project.org'))
Datasets:

On CRAN:

Conda:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

2.20 score 16 scripts 193 downloads 1 mentions 11 exports 0 dependencies

Last updated from:fe1015e29d. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK116
source / vignettesOK127
linux-release-x86_64OK106
macos-release-arm64OK131
macos-oldrel-arm64OK149
windows-develOK72
windows-releaseOK86
windows-oldrelOK85
wasm-releaseOK83

Exports:CoreSetOptimizerCoreSetterCoreSetterCombinedCoreSetterPolyHETMatMTKMtkCalcPicCalcSubsetterMTKSubsetterPIC

Dependencies:

Using GeneticSubsetter to select informative subsets of germplasm collections

Ryan C Graebner

Rendered fromGeneticSubsetterUsersGuide.Rmdusingknitr::rmarkdownon May 10 2026.

Last update: 2016-10-25
Started: 2016-10-25